MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Escherichia coli
19428wD4_HM13
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
NCBI Genome Annotation:
contigs: 110
bases: 5,033,648 bps
CDS: 4,754
rRNA: 21
tRNA: 78
tmRNA: 1
Total number of protein coding genes annotated/found:
4,625
Display
20
50
100
All items per page
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 232 pages
Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5033|JADGMH010000081.1
MBF0792983.1
Genome Viewer
NA
AA
375/125
474-98
type II/IV secretion system protein
SEQF5033|JADGMH010000080.1
MBF0792982.1
Genome Viewer
NA
AA
450/150
5-454
electron transfer flavoprotein subunit beta/FixA family protein
SEQF5033|JADGMH010000079.1
MBF0792981.1
Genome Viewer
NA
AA
482/160
1-482
NeuE protein
SEQF5033|JADGMH010000078.1
MBF0792980.1
Genome Viewer
NA
AA
365/121
127-491
poly-alpha-2%2C8 sialosyl sialyltransferase
SEQF5033|JADGMH010000077.1
MBF0792979.1
Genome Viewer
NA
AA
518/172
519-1
DUF945 domain-containing protein
SEQF5033|JADGMH010000076.1
MBF0792978.1
Genome Viewer
NA
AA
303/101
45-347
hypothetical protein
SEQF5033|JADGMH010000073.1
MBF0792977.1
Genome Viewer
NA
AA
587/195
1-587
glutamate decarboxylase
SEQF5033|JADGMH010000070.1
MBF0792976.1
Genome Viewer
NA
AA
163/54
647-809
hypothetical protein
SEQF5033|JADGMH010000070.1
MBF0792975.1
Genome Viewer
NA
AA
273/91
1-274
GTPase family protein
SEQF5033|JADGMH010000069.1
MBF0792974.1
Genome Viewer
NA
AA
125/41
705-829
transposase
SEQF5033|JADGMH010000068.1
MBF0792973.1
Genome Viewer
NA
AA
905/301
1-905
elongation factor Tu
SEQF5033|JADGMH010000067.1
MBF0792972.1
Genome Viewer
NA
AA
276/92
717-992
hypothetical protein
SEQF5033|JADGMH010000065.1
MBF0792971.1
Genome Viewer
NA
AA
340/113
699-1038
NTPase
SEQF5033|JADGMH010000065.1
MBF0792970.1
Genome Viewer
NA
AA
183/61
503-685
hypothetical protein
SEQF5033|JADGMH010000065.1
MBF0792969.1
Genome Viewer
NA
AA
106/35
106-1
helix-turn-helix domain-containing protein
SEQF5033|JADGMH010000064.1
MBF0792968.1
Genome Viewer
NA
AA
208/69
779-986
hypothetical protein
SEQF5033|JADGMH010000064.1
MBF0792967.1
Genome Viewer
NA
AA
453/151
219-671
hypothetical protein
SEQF5033|JADGMH010000063.1
MBF0792966.1
Genome Viewer
NA
AA
519/173
496-1014
Hcp family type VI secretion system effector
SEQF5033|JADGMH010000061.1
MBF0792965.1
Genome Viewer
NA
AA
531/177
601-1131
lipoprotein
SEQF5033|JADGMH010000061.1
MBF0792964.1
Genome Viewer
NA
AA
168/56
168-1
DUF4755 domain-containing protein
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 232 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI,UID,Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
